Search results for "Character evolution"

Phylogeny of Polycnemoideae (Amaranthaceae): Implications for biogeography, character evolution and taxonomy

2013

Hundreds of nuclear and plastid loci yield novel insights into orchid relationships.

2021

Pérez-Escobar, Oscar Alejandro, Dodsworth, Steven, Bogarín, Diego, Bellot, Sidonie, Balbuena, Juan A, Schley, Rowan J, Kikuchi, Izai A, Morris, Sarah K, Epitawalage, Niroshini, Cowan, Robyn, Maurin, Olivier, Zuntini, Alexandre, Arias, Tatiana, Serna-Sánchez, Alejandra, Gravendeel, Barbara, Torres Jimenez, Maria Fernanda, Nargar, Katharina, Chomicki, Guillaume, Chase, Mark W, Leitch, Ilia J, Forest, Félix, Baker, William J (2021): Hundreds of nuclear and plastid loci yield novel insights into orchid relationships. American journal of botany 108 (7): 1166-1180, DOI: http://doi.org/10.5281/zenodo.7778176

Why Africa matters: evolution of Old World Salvia (Lamiaceae) in Africa

2014

BACKGROUND AND AIMS Salvia is the largest genus in Lamiaceae and it has recently been found to be non-monophyletic. Molecular data on Old World Salvia are largely lacking. In this study, we present data concerning Salvia in Africa. The focus is on the colonization of the continent, character evolution and the switch of pollination systems in the genus. METHODS Maximum likelihood and Bayesian inference were used for phylogenetic reconstruction. Analyses were based on two nuclear markers [internal transcribed spacer (ITS) and external transcribed spacer (ETS)] and one plastid marker (rpl32-trnL). Sequence data were generated for 41 of the 62 African taxa (66 %). Mesquite was used to reconstru…

Insights into the evolutionary history of the subfamily orthotrichoideae (Orthotrichaceae, Bryophyta): new and former supra-specific taxa so far obsc…

2021

Mosses of the subfamily Orthotrichoideae represent one of the main components of the cryptogam epiphytic communities in temperate areas. During the last two decades, this taxonomical group has undergone an extensive revision that has led to its rearrangement at the generic level. However, their phylogenetic relationships and inferences on the evolutionary patterns that have driven the present diversity have little advanced. In this study, we present a dated molecular phylogenetic reconstruction at the subfamily level, including 130 samples that represent the 12 genera currently recognized within the subfamily, and the analysis of four molecular markers: ITS2, rps4, trnG, and trnL-F. We also…

EST based phylogenomics of Syndermata questions monophyly of Eurotatoria

2008

Abstract Background The metazoan taxon Syndermata comprising Rotifera (in the classical sense of Monogononta+Bdelloidea+Seisonidea) and Acanthocephala has raised several hypotheses connected to the phylogeny of these animal groups and the included subtaxa. While the monophyletic origin of Syndermata and Acanthocephala is well established based on morphological and molecular data, the phylogenetic position of Syndermata within Spiralia, the monophyletic origin of Monogononta, Bdelloidea, and Seisonidea and the acanthocephalan sister group are still a matter of debate. The comparison of the alternative hypotheses suggests that testing the phylogenetic validity of Eurotatoria (Monogononta+Bdel…

Phylogeny of Sesuvioideae (Aizoaceae) – Biogeography, leaf anatomy and the evolution of C4 photosynthesis

2015

Abstract Sesuvioideae (Aizoaceae) form a small subfamily of drought-tolerant plants exhibiting leaf succulence, halophytic ecology, and the C4 photosynthetic pathway. Sesuvioideae are sister to the species-rich subfamilies Ruschioideae, Mesembryanthemoideae and Aizooideae that contain many CAM lineages. This close relationship of CAM and C4 taxa identifies the Sesuvioideae as an important clade to address hypotheses of photosynthetic pathway evolution. This study presents a molecular phylogeny of Sesuvioideae based on five markers (atpB-rbcL spacer, rps16 intron, trnL-trnF spacer, petB-petD spacer, ITS) and 51 accessions representing all genera and 37 species. We determined carbon isotope d…

Time to split Salvia s.l. (Lamiaceae) - New insights from Old World Salvia phylogeny.

2017

Abstract Aims Salvia L. is widely known as the largest genus in the mint family. A morphological modification of the androecium (lever-like stamens) was used to support this genus. However, molecular data revealed that Salvia is polyphyletic. Since phylogenetic studies largely underrepresented Old World Salvia species, we filled this gap and combined new data with existing sequences. The aim of our study was the identification of well-supported clades that provide the basis for evolutionary and taxonomic conclusions. Methods We included ITS data (internal transcribed spacer) from 220 Salvia species, 86 of which were sequenced for the first time. Additionally, the highly variable plastid mar…

Phylogeny, biogeography, and morphological ancestral character reconstruction in the Mediterranean genus Fumana (Cistaceae)

2020

Fumana is a diverse genus of the Cistaceae family, consisting of 21 currently accepted species. In this study, nuclear (ITS) and plastid (matK, trnT‐L) molecular markers were used to reconstruct the phylogeny and to estimate divergence times, including 19 species of Fumana. Phylogenetic analyses (Bayesian Inference, Maximum Parsimony and Maximum Likelihood) confirmed the monophyly of Fumana and did not support the infrageneric divisions previously established. The results support four main clades that group species that differ in vegetative and reproductive characters. Given the impossibility to define morphological characters common to all species within the clades, our proposal is to reje…

Towards a new classification of Salvia s.l.: (re)establishing the genus Pleudia Raf.

2015

Salvia L. In its traditional circumscription is the largest genus within the mint family. To date, the magnitude of the task has rendered it difficult to provide a genus-wide revision based on morphological data. Current molecular investigations based on a dense taxon sampling representing the whole phenotypic diversity and distribution range of Salvia confirmed that the genus is polyphyletic. Salvia species fall in 4 distinct clades, although all of them, except Clade IV, also include non-Salvia genera. A taxonomic revision is thus urgently needed with two different approaches that have to be considered: (1) to include the 5 morphologically distinct non-Salvia genera in Salvia or (2) to sp…

Evolution of gynoecium morphology in Old World Papaveroideae: a combined phylogenetic/ontogenetic approach.

2011

PREMISE OF THE STUDY: The correct assessment of homology is an important prerequisite for reconstructing phylogenetic relationships and character evolution. Old World Papaveroideae (Papaver, Meconopsis, Roemeria, Stylomecon) show substantial diversity in gynoecium and capsule morphology. In particular, capsules can have distinct styles (Meconopsis p.p., Stylomecon) or a sessile stigmatic disc (Papaver). Molecular phylogenetic analyses of Old World Papaveroideae had shown that neither taxa with styles nor those with stigmatic discs represent monophyletic lineages. We here investigate whether either styles or stigmatic discs have arisen repeatedly during the diversification of Old World Papav…